BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039G10LP1|AL430757
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig436 1904 0.0
>3x_Contig436
Length = 1820
Score = 1904 bits (959), Expect = 0.0
Identities = 961/963 (99%)
Strand = Plus / Minus
Query: 1 gatccattcagaggtactggcccatcaccaaatccgcagagtggcaaccatgatccaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 gatccattcagaggtactggcccatcaccaaatccgcagagtggcaaccatgatccaggt 1126
Query: 61 caaaattcctccccagctggcccacaattccccggaactaaatatgacgatccatacggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 caaaattcctccccagctggcccacaattccccggaactaaatatgacgatccatacggt 1066
Query: 121 agaataaatcgccaaggtggcggtggaggtttcatttagcatttctattggaaataaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 agaataaatcgccaaggtggcggtggaggtttcatttagcatttctattggaaataaata 1006
Query: 181 cattgtttaagtatgtagaaataaaatatgtcgtattgcgtacgaatagctatattcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 cattgtttaagtatgtagaaataaaatatgtcgtattgcgtacgaatagctatattcatg 946
Query: 241 ttgcttccagataaaatatgctcatcgatgggacccgttaatagaatatcattattgtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 ttgcttccagataaaatatgctcatcgatgggacccgttaatagaatatcattattgtta 886
Query: 301 ttcgtctgattttgaactatgcgtataaacagcaagagttttatcctctcgtttgtatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 ttcgtctgattttgaactatgcgtataaacagcaagagttttatcctctcgtttgtatat 826
Query: 361 taacacttggacgttatcgtgttccaagataccgaatccatcttgatctagttccacctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 taacacttggacgttatcgtgttccaagataccgaatccatcttgatctagttccacctg 766
Query: 421 ctgtaattggagaacatcttcttttctctcctttccaattcccactgcttcaataatttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ctgtaattggagaacatcttcttttctctcctttccaattcccactgcttcaataatttg 706
Query: 481 accagcatcatcaaaagctatcattccaatggcattaggcaccatttcagccaaattaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 accagcatcatcaaaagctatcattccaatggcattaggcaccatttcagccaaattaag 646
Query: 541 actcatgctaactttagttttcgattgacttctaacgaatgaratgtcaggatgggcact 600
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 645 actcatgctaactttagttttcgattgacttctaacgaatgaaatgtcaggatgggcact 586
Query: 601 atttctgctggccggacttatcttaagttgacaatatttaaattagcactttcgatattc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 atttctgctggccggacttatcttaagttgacaatatttaaattagcactttcgatattc 526
Query: 661 atattataaagtaaagccaaaaataaagaaaataaatataaataaacggaagcaagggtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atattataaagtaaagccaaaaataaagaaaataaatataaataaacggaagcaagggtg 466
Query: 721 taaatcagtaagactttgaaaacattgaccggtgtgtttgttggtagtccagacaaggac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 taaatcagtaagactttgaaaacattgaccggtgtgtttgttggtagtccagacaaggac 406
Query: 781 ttgaaaaatatccaatgagagcactatggctactgcttttacttgcagttatattcatgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttgaaaaatatccaatgagagcactatggctactgcttttacttgcagttatattcatgg 346
Query: 841 ctgtggctgctttttactttgtcaatcgggttttatcgttcaaactttataagaacaatt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ctgtggctgctttttactttgtcaatcgggttttatcgttcaaactttataagaacaatt 286
Query: 901 atccagccaccttatttgtgcyattgcttaatatgttcctcttactctccatcgcatact 960
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atccagccaccttatttgtgctattgcttaatatgttcctcttactctccatcgcatact 226
Query: 961 tac 963
|||
Sbjct: 225 tac 223
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7528
Number of Sequences: 1807
Number of extensions: 7528
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)